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vermeulen: Biomarker Data Set by Vermeulen et al. (2009)

The biomarker data set by Vermeulen et al. (2009) <doi:10.1016/S1470-2045(09)70154-8> is provided. The data source, however, is by Ruijter et al. (2013) <doi:10.1016/j.ymeth.2012.08.011>. The original data set may be downloaded from <https://medischebiologie.nl/wp-content/uploads/2019/02/qpcrdatamethods.zip>. This data set is for a real-time quantitative polymerase chain reaction (PCR) experiment that comprises the raw fluorescence data of 24,576 amplification curves. This data set comprises 59 genes of interest and 5 reference genes. Each gene was assessed on 366 neuroblastoma complementary DNA (cDNA) samples and on 18 standard dilution series samples (10-fold 5-point dilution series x 3 replicates + no template controls (NTC) x 3 replicates).

Version: 0.1.2
Depends: R (≥ 2.10)
Imports: memoise
Suggests: dplyr, ggplot2, rmarkdown, spelling, testthat (≥ 3.0.0), tibble
Published: 2024-04-22
DOI: 10.32614/CRAN.package.vermeulen
Author: Ramiro Magno ORCID iD [aut, cre], Pattern Institute [cph, fnd]
Maintainer: Ramiro Magno <rmagno at pattern.institute>
BugReports: https://github.com/ramiromagno/vermeulen/issues
License: CC BY 4.0
URL: https://github.com/ramiromagno/vermeulen, https://rmagno.eu/vermeulen/
NeedsCompilation: no
Language: en-US
Materials: README NEWS
CRAN checks: vermeulen results

Documentation:

Reference manual: vermeulen.pdf

Downloads:

Package source: vermeulen_0.1.2.tar.gz
Windows binaries: r-devel: vermeulen_0.1.2.zip, r-release: vermeulen_0.1.2.zip, r-oldrel: vermeulen_0.1.2.zip
macOS binaries: r-release (arm64): vermeulen_0.1.2.tgz, r-oldrel (arm64): vermeulen_0.1.2.tgz, r-release (x86_64): vermeulen_0.1.2.tgz, r-oldrel (x86_64): vermeulen_0.1.2.tgz
Old sources: vermeulen archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=vermeulen to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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