The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.

vcfppR 0.8.1

• remove unused code in vcfpp.h
• vcfcomp: rename the col name “concordance” as “accuracy”

vcfppR 0.8.0

• copy static libs into libs folder

vcfppR 0.7.6

• fix CRAN notes

vcfppR 0.7.5

• fix issue #14 to handle libdeflate dependency on linux

vcfppR 0.7.4

• fix issue #13 to speedup setRegion

vcfppR 0.7.3

• enable libdeflate on linux

vcfppR 0.7.2

• make htslib available for including and linking by other packages

vcfppR 0.7.0

• fix parsing BCF when subsetting sample ids and the genomic region at the same time
• fix vcfcomp with stats="nrc" when the input vectors have different length
• use the latest version of htslib v1.21
• reduce the size of installation

vcfppR 0.6.0

• upgrade vcfpp.h to v0.6.0
• new API vcfreader$setRegion
• new API vcfreader$getStatus

vcfppR 0.5.0

• upgrade vcfpp.h to v0.5.1
• add bcfreader$updateSamples() function
• vcfcomp: can take vcftable object as input
• vcfcomp: defaults changed setid=FALSE
• bug fix

vcfppR 0.4.6

• add vcfplot function
• fix bug in vcftable when FORMAT has unaligned list
• add vignette on vcfcomp

vcfppR 0.4.5

• add vcfcomp function
• fix memory leaks and pass ASAN check

vcfppR 0.4.0

• add setid option for vcftable
• patches for upcoming Rtools on windows

vcfppR 0.3.8

• fix issues on M1 Mac

vcfppR 0.3.7

• add vcfreader@rmFormatTag()
• add vcfreader@samples()
• vcftable supports vartype = ‘sv’

vcfppR 0.3.6

• add vcfreader::line
• remove vcfreader::setVariant
• bug fix setFormatStr
• more units tests

vcfppR 0.3.5

• add vcfreader and vcfwriter

vcfppR 0.3.4

• support filters by variant ID

vcfppR 0.3.3

• use API of vcfpp.h v0.3.1
• set missing vaules in FORMAT to NA
• support filters by QUAL, FILTER and INFO

vcfppR 0.3.0

• First release using vcfpp.h v0.3.0
• add vcftable function
• add vcfsummary function
• add vcfpopgen function

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.