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Read and manipulate genome intervals and signals. Provides functionality similar to command-line tool suites within R, enabling interactive analysis and visualization of genome-scale data. Riemondy et al. (2017) <doi:10.12688/f1000research.11997.1>.
Version: | 0.8.1 |
Depends: | R (≥ 3.1.2) |
Imports: | broom, cli, dplyr (≥ 0.8.0), ggplot2, lifecycle, Rcpp (≥ 1.0.0), readr, rlang, rtracklayer, stringr, tibble (≥ 1.4.2) |
LinkingTo: | Rcpp (≥ 1.0.0) |
Suggests: | bench, covr, cowplot, curl, DBI, dbplyr, devtools, DT, GenomicRanges, IRanges, knitr, purrr, RMariaDB, rmarkdown, S4Vectors, testthat (≥ 3.0.0), vdiffr (≥ 1.0.0), tidyr |
Published: | 2024-04-22 |
DOI: | 10.32614/CRAN.package.valr |
Author: | Jay Hesselberth |
Maintainer: | Kent Riemondy <kent.riemondy at cuanschutz.edu> |
BugReports: | https://github.com/rnabioco/valr/issues |
License: | MIT + file LICENSE |
URL: | https://github.com/rnabioco/valr/, https://rnabioco.github.io/valr/ |
NeedsCompilation: | yes |
Citation: | valr citation info |
Materials: | README NEWS |
In views: | Omics |
CRAN checks: | valr results |
Reference manual: | valr.pdf |
Vignettes: |
valr-overview |
Package source: | valr_0.8.1.tar.gz |
Windows binaries: | r-devel: valr_0.8.1.zip, r-release: valr_0.8.1.zip, r-oldrel: valr_0.8.1.zip |
macOS binaries: | r-release (arm64): valr_0.8.1.tgz, r-oldrel (arm64): valr_0.8.1.tgz, r-release (x86_64): valr_0.8.1.tgz, r-oldrel (x86_64): valr_0.8.1.tgz |
Old sources: | valr archive |
Please use the canonical form https://CRAN.R-project.org/package=valr to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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