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Computing diversity measures on tripartite graphs. This package first implements a parametrized family of such diversity measures which apply on probability distributions. Sometimes called "True Diversity", this family contains famous measures such as the richness, the Shannon entropy, the Herfindahl-Hirschman index, and the Berger-Parker index. Second, the package allows to apply these measures on probability distributions resulting from random walks between the levels of tripartite graphs. By defining an initial distribution at a given level of the graph and a path to follow between the three levels, the probability of the walker's position within the final level is then computed, thus providing a particular instance of diversity to measure.
| Version: | 1.0 |
| Depends: | R (≥ 3.2.3), Matrix, data.tree |
| Published: | 2017-10-11 |
| DOI: | 10.32614/CRAN.package.triversity |
| Author: | Robin Lamarche-Perrin [aut, cre] |
| Maintainer: | Robin Lamarche-Perrin <Robin.Lamarche-Perrin at lip6.fr> |
| License: | GPL-3 | file LICENSE |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | triversity results |
| Reference manual: | triversity.pdf |
| Package source: | triversity_1.0.tar.gz |
| Windows binaries: | r-devel: triversity_1.0.zip, r-release: triversity_1.0.zip, r-oldrel: triversity_1.0.zip |
| macOS binaries: | r-release (arm64): triversity_1.0.tgz, r-oldrel (arm64): triversity_1.0.tgz, r-release (x86_64): triversity_1.0.tgz, r-oldrel (x86_64): triversity_1.0.tgz |
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