treespace: Statistical Exploration of Landscapes of Phylogenetic Trees
Tools for the exploration of distributions of phylogenetic trees. This package includes a 'shiny' interface which can be started from R using treespaceServer(). For further details see Jombart et al. (2017) <doi:10.1111/1755-0998.12676>.
| Version: | 1.1.4.3 |
| Depends: | R (≥ 3.4.0), ape, ade4 |
| Imports: | adegenet, adegraphics, combinat, compiler, distory, fields, htmlwidgets, MASS, methods, parallel, phangorn, phytools, Rcpp, rgl, RLumShiny, scatterD3, shiny, shinyBS, utils |
| LinkingTo: | Rcpp |
| Suggests: | ggplot2, igraph, knitr, pander, RColorBrewer, reshape2, rmarkdown, sf, testthat |
| Published: | 2023-09-07 |
| DOI: | 10.32614/CRAN.package.treespace |
| Author: | Thibaut Jombart 
[aut],
Michelle Kendall
[aut, cre],
Jacob Almagro-Garcia
[aut],
Caroline Colijn
[aut] |
| Maintainer: | Michelle Kendall <michelle.kendall at warwick.ac.uk> |
| BugReports: | https://github.com/thibautjombart/treespace/issues |
| License: | MIT + file LICENSE |
| URL: | https://cran.r-project.org/package=treespace, https://github.com/thibautjombart/treespace |
| NeedsCompilation: | yes |
| Citation: | treespace citation info |
| Materials: | README NEWS |
| In views: | Phylogenetics |
| CRAN checks: | treespace results |
Documentation:
Downloads:
| Package source: | treespace_1.1.4.3.tar.gz |
| Windows binaries: | r-devel: treespace_1.1.4.3.zip, r-release: treespace_1.1.4.3.zip, r-oldrel: treespace_1.1.4.3.zip |
| macOS binaries: | r-release (arm64): treespace_1.1.4.3.tgz, r-oldrel (arm64): treespace_1.1.4.3.tgz, r-release (x86_64): treespace_1.1.4.3.tgz, r-oldrel (x86_64): treespace_1.1.4.3.tgz |
| Old sources: | treespace archive |
Linking:
Please use the canonical form https://CRAN.R-project.org/package=treespace to link to this page.