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transport: Computation of Optimal Transport Plans and Wasserstein Distances

Solve optimal transport problems. Compute Wasserstein distances (a.k.a. Kantorovitch, Fortet–Mourier, Mallows, Earth Mover's, or minimal L_p distances), return the corresponding transference plans, and display them graphically. Objects that can be compared include grey-scale images, (weighted) point patterns, and mass vectors.

Version: 0.15-4
Depends: R (≥ 4.1)
Imports: grDevices, graphics, methods, stats, Rcpp (≥ 0.12.10), data.table
LinkingTo: RcppEigen, Rcpp
Suggests: animation, ks, testthat
Published: 2024-09-16
DOI: 10.32614/CRAN.package.transport
Author: Dominic Schuhmacher [aut, cre], Björn Bähre [aut] (aha and power diagrams), Nicolas Bonneel [aut] (networkflow), Carsten Gottschlich [aut] (simplex and shortlist), Valentin Hartmann [aut] (semidiscrete1), Florian Heinemann [aut] (transport_track and networkflow integration), Bernhard Schmitzer [aut] (shielding), Jörn Schrieber [aut] (subsampling), Timo Wilm [ctb] (wpp)
Maintainer: Dominic Schuhmacher <dominic.schuhmacher at mathematik.uni-goettingen.de>
BugReports: https://github.com/dschuhmacher/transport/issues
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: https://dschuhm1.pages.gwdg.de/software
NeedsCompilation: yes
Citation: transport citation info
Materials: README NEWS INSTALL
CRAN checks: transport results

Documentation:

Reference manual: transport.pdf

Downloads:

Package source: transport_0.15-4.tar.gz
Windows binaries: r-devel: transport_0.15-4.zip, r-release: transport_0.15-4.zip, r-oldrel: transport_0.15-4.zip
macOS binaries: r-release (arm64): transport_0.15-4.tgz, r-oldrel (arm64): transport_0.15-4.tgz, r-release (x86_64): transport_0.15-4.tgz, r-oldrel (x86_64): transport_0.15-4.tgz
Old sources: transport archive

Reverse dependencies:

Reverse imports: AnomalyScore, corral, cylcop, CytoMDS, drf, Ecume, epiphy, GMPro, kanjistat, LOMAR, nearBynding, optimalFlow, otinference, SBCK, scDiagnostics
Reverse suggests: priorsense, provenance

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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