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tr_usda()
is defunct. The API is down for good (#122)coral_*
functions are defunct (#124)ncbi_searcher()
fix: we weren’t including the NCBI Entrez API key even when it was found (#120)taxa_search
: removed traitbank
option because traits::traitbank()
used internally has completely changed and it’s no longer feasible to do a straight-forward taxon search for all traits in EOL’s Traitbank (#115)ncbi_searcher()
to prevent failures in some cases (#107) thanks @zachary-fosterncbi_byid()
: ten new fields added to the output (#101) (#102) thanks @boopsboops?traits-defunct
for more information. Deprecated functions: eol_invasive_()
, fe_native()
, g_invasive()
, is_native()
(#72)tr_ernest
for a dataset of Amniote life history data (#60)tr_usda
for the USDA plants database (#61)tr_zanne
for a dataset of plant growth data (#73)readr > 1.0
(#76)ncbi_*()
functions to give back NA
types that match data.frame column classes to make combining easier (#96)xml2::xml_find_one
with xml2::xml_find_first
throughout (#97)birdlife*
functions that needed to change URL structure due to changes in the Birdlife website (#100)traitbank()
(#79) (#80) thanks @dschlaep !ncbi_*()
fxns now use https (#95)?traits-deprecated
for more information. Deprecated functions: eol_invasive_()
, fe_native()
, g_invasive()
, is_native()
(#63)httr::content()
calls now explicitly setting encoding to UTF-8
, and parsing to text
, then manually parsing either JSON or XML later (#65)XML
with xml2
for XML parsing (#67)ncbi_searcher()
gains new parameter fuzzy
to toggle fuzzy taxonomic ID search or exact search. (#34) (thx @mpnelsen)importFrom
) used across all imports now. In addition, importFrom
for all non-base R pkgs, including methods
, stats
and utils
packages (#36)trait
parameter in traitbank()
function to pageid
, because EOL expects a page identifier, which is associated with a taxon, not a trait. The previous parameter name was very misleading.These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.