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topr: Create Custom Plots for Viewing Genetic Association Results

A collection of functions for visualizing,exploring and annotating genetic association results.Association results from multiple traits can be viewed simultaneously along with gene annotation, over the entire genome (Manhattan plot) or in the more detailed regional view.

Version: 2.0.2
Depends: R (≥ 3.5.0)
Imports: ggplot2 (≥ 3.3.2), dplyr (≥ 1.0.2), stringr (≥ 1.4.0), scales (≥ 1.1.1), ggrepel, egg, grid, gridExtra, magrittr (≥ 1.5), utils, tidyr, enshuman
Suggests: testthat (≥ 3.0.0), knitr, rmarkdown, markdown
Published: 2024-06-19
DOI: 10.32614/CRAN.package.topr
Author: Thorhildur Juliusdottir [cph, aut, cre], Andri Stefansson [aut]
Maintainer: Thorhildur Juliusdottir <totajuliusd at gmail.com>
BugReports: https://github.com/totajuliusd/topr/issues
License: LGPL (≥ 3)
URL: https://github.com/totajuliusd/topr
NeedsCompilation: no
Materials: NEWS
CRAN checks: topr results

Documentation:

Reference manual: topr.pdf

Downloads:

Package source: topr_2.0.2.tar.gz
Windows binaries: r-devel: topr_2.0.2.zip, r-release: topr_2.0.2.zip, r-oldrel: topr_2.0.2.zip
macOS binaries: r-release (arm64): topr_2.0.2.tgz, r-oldrel (arm64): topr_2.0.2.tgz, r-release (x86_64): topr_2.0.2.tgz, r-oldrel (x86_64): topr_2.0.2.tgz
Old sources: topr archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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