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tmod: Feature Set Enrichment Analysis for Metabolomics and
Transcriptomics
Methods and feature set definitions for feature or gene set
enrichment analysis in transcriptional and metabolic profiling data.
Package includes tests for enrichment based on ranked lists of features,
functions for visualisation and multivariate functional analysis. See Zyla et al (2019)
<doi:10.1093/bioinformatics/btz447>.
| Version: |
0.50.13 |
| Depends: |
R (≥ 2.10) |
| Imports: |
beeswarm, tagcloud, XML, methods, plotwidgets, RColorBrewer, gplots, tibble, pheatmap, ggplot2, tidyr, purrr, rlang, tidyselect, ggrepel |
| Suggests: |
testthat, knitr, rmarkdown, dplyr, pander, cowplot |
| Published: |
2023-03-31 |
| Author: |
January Weiner 
[aut, cre] |
| Maintainer: |
January Weiner <january.weiner at gmail.com> |
| License: |
GPL-2 | GPL-3 [expanded from: GPL (≥ 2.0)] |
| URL: |
https://tmod.online, https://github.com/january3/tmod/,
https://january3.github.io/tmod/ |
| NeedsCompilation: |
no |
| Citation: |
tmod citation info |
| Materials: |
README ChangeLog |
| In views: |
Omics |
| CRAN checks: |
tmod results |
Documentation:
Downloads:
Reverse dependencies:
Linking:
Please use the canonical form
https://CRAN.R-project.org/package=tmod
to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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