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submitr: Scaffold and Submit Computational Jobs to HTC Schedulers
Provides scaffolding tools to help researchers prepare and submit
computational jobs to high-throughput computing (HTC) schedulers. Generates
the files required to run containerized R analyses on 'HTCondor', including
submit files and executable scripts, and wraps the system commands needed to
stage files, submit jobs, monitor status, and retrieve results from a CHTC
submit node. Provides 'htc_config()' for managing connection details and
SSH connection reuse guidance. Works naturally alongside 'containr' for
container image management and 'toolero' for dataset splitting and project
scaffolding.
| Version: |
0.1.0 |
| Imports: |
cli, glue, readr, yaml |
| Suggests: |
containr, knitr, rmarkdown, spelling, testthat (≥ 3.0.0), toolero, withr |
| Published: |
2026-05-19 |
| DOI: |
10.32614/CRAN.package.submitr (may not be active yet) |
| Author: |
Erwin Lares  [aut,
cre] |
| Maintainer: |
Erwin Lares <erwin.lares at wisc.edu> |
| BugReports: |
https://github.com/erwinlares/submitr/issues |
| License: |
MIT + file LICENSE |
| URL: |
https://erwinlares.github.io/submitr/ |
| NeedsCompilation: |
no |
| SystemRequirements: |
SSH client, HTCondor (https://htcondor.org) |
| Language: |
en-US |
| Materials: |
README, NEWS |
| CRAN checks: |
submitr results |
Documentation:
Downloads:
Linking:
Please use the canonical form
https://CRAN.R-project.org/package=submitr
to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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