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Simulates somatic single base substitutions carried in cancer genomes. By only providing a human reference genome, substitutions that result from mutational processes operative in every cancer genome can be generated.
| Version: | 0.17.3 |
| Depends: | R (≥ 3.0.0), doParallel, utils, foreach, parallel, stats |
| Imports: | Biostrings, BSgenome, GenomeInfoDb, GenomicRanges, IRanges, XVector |
| Suggests: | BSgenome.Hsapiens.UCSC.hg38 |
| Published: | 2017-04-21 |
| DOI: | 10.32614/CRAN.package.simMP |
| Author: | Nan Zhou |
| Maintainer: | Nan Zhou <zhnanx at gmail.com> |
| License: | GPL-2 |
| NeedsCompilation: | no |
| CRAN checks: | simMP results |
| Reference manual: | simMP.pdf |
| Package source: | simMP_0.17.3.tar.gz |
| Windows binaries: | r-devel: simMP_0.17.3.zip, r-release: simMP_0.17.3.zip, r-oldrel: simMP_0.17.3.zip |
| macOS binaries: | r-release (arm64): simMP_0.17.3.tgz, r-oldrel (arm64): simMP_0.17.3.tgz, r-release (x86_64): simMP_0.17.3.tgz, r-oldrel (x86_64): simMP_0.17.3.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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