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Predicts the presence of signal peptides in eukaryotic protein using hidden semi-Markov models. The implemented algorithm can be accessed from both the command line and GUI.
Version: | 1.5 |
Depends: | R (≥ 3.0.0) |
Imports: | graphics, seqinr, shiny, stats, utils |
LinkingTo: | Rcpp |
Suggests: | DT, rmarkdown, shinythemes |
Published: | 2018-11-15 |
DOI: | 10.32614/CRAN.package.signalHsmm |
Author: | Michal Burdukiewicz
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Maintainer: | Michal Burdukiewicz <michalburdukiewicz at gmail.com> |
License: | GPL-3 |
URL: | https://github.com/michbur/signalhsmm |
NeedsCompilation: | yes |
Citation: | signalHsmm citation info |
Materials: | README ChangeLog |
CRAN checks: | signalHsmm results |
Reference manual: | signalHsmm.pdf |
Package source: | signalHsmm_1.5.tar.gz |
Windows binaries: | r-devel: signalHsmm_1.5.zip, r-release: signalHsmm_1.5.zip, r-oldrel: signalHsmm_1.5.zip |
macOS binaries: | r-release (arm64): signalHsmm_1.5.tgz, r-oldrel (arm64): signalHsmm_1.5.tgz, r-release (x86_64): signalHsmm_1.5.tgz, r-oldrel (x86_64): signalHsmm_1.5.tgz |
Old sources: | signalHsmm archive |
Reverse suggests: | factR |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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