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R version of 'scperturb' tool for single-cell perturbation analysis. Contains wrappers for performing E-statistics for Seurat objects. More details on the method can be found in Peidli et al. (2023) <doi:10.1101/2022.08.20.504663> and in Székely and Rizzo (2004).
| Version: | 0.1.0 |
| Depends: | R (≥ 3.5.0) |
| Imports: | Seurat, dplyr, rdist, energy, stats |
| Suggests: | testthat (≥ 3.0.0) |
| Published: | 2023-03-01 |
| DOI: | 10.32614/CRAN.package.scperturbR |
| Author: | Stefan Peidli |
| Maintainer: | Stefan Peidli <stefanpeidli at gmail.com> |
| BugReports: | https://github.com/sanderlab/scPerturb/issues |
| License: | MIT + file LICENSE |
| URL: | https://github.com/sanderlab/scPerturb/tree/master/package_r |
| NeedsCompilation: | no |
| Language: | en-US |
| Materials: | NEWS |
| CRAN checks: | scperturbR results |
| Reference manual: | scperturbR.pdf |
| Package source: | scperturbR_0.1.0.tar.gz |
| Windows binaries: | r-devel: scperturbR_0.1.0.zip, r-release: scperturbR_0.1.0.zip, r-oldrel: scperturbR_0.1.0.zip |
| macOS binaries: | r-release (arm64): scperturbR_0.1.0.tgz, r-oldrel (arm64): scperturbR_0.1.0.tgz, r-release (x86_64): scperturbR_0.1.0.tgz, r-oldrel (x86_64): scperturbR_0.1.0.tgz |
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These binaries (installable software) and packages are in development.
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