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scperturbR: E-Statistics for Seurat Objects

R version of 'scperturb' tool for single-cell perturbation analysis. Contains wrappers for performing E-statistics for Seurat objects. More details on the method can be found in Peidli et al. (2023) <doi:10.1101/2022.08.20.504663> and in Székely and Rizzo (2004).

Version: 0.1.0
Depends: R (≥ 3.5.0)
Imports: Seurat, dplyr, rdist, energy, stats
Suggests: testthat (≥ 3.0.0)
Published: 2023-03-01
DOI: 10.32614/CRAN.package.scperturbR
Author: Stefan Peidli
Maintainer: Stefan Peidli <stefanpeidli at gmail.com>
BugReports: https://github.com/sanderlab/scPerturb/issues
License: MIT + file LICENSE
URL: https://github.com/sanderlab/scPerturb/tree/master/package_r
NeedsCompilation: no
Language: en-US
Materials: NEWS
CRAN checks: scperturbR results

Documentation:

Reference manual: scperturbR.pdf

Downloads:

Package source: scperturbR_0.1.0.tar.gz
Windows binaries: r-devel: scperturbR_0.1.0.zip, r-release: scperturbR_0.1.0.zip, r-oldrel: scperturbR_0.1.0.zip
macOS binaries: r-release (arm64): scperturbR_0.1.0.tgz, r-oldrel (arm64): scperturbR_0.1.0.tgz, r-release (x86_64): scperturbR_0.1.0.tgz, r-oldrel (x86_64): scperturbR_0.1.0.tgz

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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