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Currently available scGate vignettes:
A demo of the basic functionalities of scGate on scRNA-seq data - scGate basics
Purifying cells on multi-modal scATAC-seq + scRNA-seq data - scGate ATAC+RNA
Purifying cells on CITE-seq data - scGate CITE-seq
scGate to annotate scRNA-seq datasets integrated with Harmony and STACAS - scGate integrated
More information available at the scGate repository at on the related publication.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.