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qtlhot: Inference for QTL Hotspots

Functions to infer co-mapping trait hotspots and causal models. Chaibub Neto E, Keller MP, Broman AF, Attie AD, Jansen RC, Broman KW, Yandell BS (2012) Quantile-based permutation thresholds for QTL hotspots. Genetics 191 : 1355-1365. <doi:10.1534/genetics.112.139451>. Chaibub Neto E, Broman AT, Keller MP, Attie AD, Zhang B, Zhu J, Yandell BS (2013) Modeling causality for pairs of phenotypes in system genetics. Genetics 193 : 1003-1013. <doi:10.1534/genetics.112.147124>.

Version: 1.0.4
Depends: stats, qtl, mnormt, utils, corpcor, R (≥ 2.10)
Published: 2018-04-05
DOI: 10.32614/CRAN.package.qtlhot
Author: Elias Chaibub Neto and Brian S Yandell
Maintainer: Brian S. Yandell <brian.yandell at wisc.edu>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: http://www.stat.wisc.edu/~yandell/statgen
NeedsCompilation: yes
Materials: README
CRAN checks: qtlhot results

Documentation:

Reference manual: qtlhot.pdf
Vignettes: CMST Tutorial
Qtlhot Tutorial

Downloads:

Package source: qtlhot_1.0.4.tar.gz
Windows binaries: r-devel: qtlhot_1.0.4.zip, r-release: qtlhot_1.0.4.zip, r-oldrel: qtlhot_1.0.4.zip
macOS binaries: r-release (arm64): qtlhot_1.0.4.tgz, r-oldrel (arm64): qtlhot_1.0.4.tgz, r-release (x86_64): qtlhot_1.0.4.tgz, r-oldrel (x86_64): qtlhot_1.0.4.tgz
Old sources: qtlhot archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=qtlhot to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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