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qtl2pleio: Testing Pleiotropy in Multiparental Populations
We implement an
adaptation of Jiang & Zeng's (1995) <https://www.genetics.org/content/140/3/1111> likelihood ratio test for testing
the null hypothesis of pleiotropy against the alternative hypothesis,
two separate quantitative trait loci. The test differs from that in Jiang & Zeng (1995) <https://www.genetics.org/content/140/3/1111>
and that in Tian et al. (2016) <doi:10.1534/genetics.115.183624> in
that our test accommodates multiparental populations.
| Version: |
1.4.3 |
| Depends: |
R (≥ 3.2) |
| Imports: |
dplyr, gemma2, ggplot2, magrittr, MASS, Rcpp, rlang, tibble, parallel |
| LinkingTo: |
Rcpp, RcppEigen |
| Suggests: |
covr, mvtnorm, knitr, rmarkdown, testthat, broman, devtools, qtl2, parallelly |
| Published: |
2020-12-02 |
| Author: |
Frederick J Boehm 
[aut, cre] |
| Maintainer: |
Frederick J Boehm <frederick.boehm at gmail.com> |
| BugReports: |
https://github.com/fboehm/qtl2pleio/issues |
| License: |
MIT + file LICENSE |
| URL: |
https://github.com/fboehm/qtl2pleio |
| NeedsCompilation: |
yes |
| Language: |
en-US |
| Citation: |
qtl2pleio citation info |
| Materials: |
README NEWS |
| CRAN checks: |
qtl2pleio results |
Documentation:
Downloads:
Linking:
Please use the canonical form
https://CRAN.R-project.org/package=qtl2pleio
to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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