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Comprehensive toolkit for generating various numerical features of protein sequences described in Xiao et al. (2015) <doi:10.1093/bioinformatics/btv042>. For full functionality, the software 'ncbi-blast+' is needed, see <https://blast.ncbi.nlm.nih.gov/doc/blast-help/downloadblastdata.html> for more information.
Version: | 1.7-2 |
Depends: | R (≥ 3.0.2) |
Suggests: | knitr, rmarkdown, Biostrings, GOSemSim, foreach, doParallel, org.Hs.eg.db |
Published: | 2024-07-21 |
DOI: | 10.32614/CRAN.package.protr |
Author: | Nan Xiao |
Maintainer: | Nan Xiao <me at nanx.me> |
BugReports: | https://github.com/nanxstats/protr/issues |
License: | BSD_3_clause + file LICENSE |
URL: | https://nanx.me/protr/, https://github.com/nanxstats/protr, http://protr.org |
NeedsCompilation: | no |
SystemRequirements: | ncbi-blast+ (see <https://blast.ncbi.nlm.nih.gov/doc/blast-help/downloadblastdata.html>) |
Citation: | protr citation info |
Materials: | README NEWS |
CRAN checks: | protr results |
Reference manual: | protr.pdf |
Vignettes: |
protr: R package for generating various numerical representation schemes of protein sequences |
Package source: | protr_1.7-2.tar.gz |
Windows binaries: | r-devel: protr_1.7-2.zip, r-release: protr_1.7-2.zip, r-oldrel: protr_1.7-2.zip |
macOS binaries: | r-release (arm64): protr_1.7-2.tgz, r-oldrel (arm64): protr_1.7-2.tgz, r-release (x86_64): protr_1.7-2.tgz, r-oldrel (x86_64): protr_1.7-2.tgz |
Old sources: | protr archive |
Reverse imports: | HPiP, PredCRG, surfaltr |
Please use the canonical form https://CRAN.R-project.org/package=protr to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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