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poolVIM: Gene-Based Association Tests using the Actual Impurity Reduction (AIR) Variable Importance

Gene-based association tests using the actual impurity reduction (AIR) variable importance. The function aggregates AIR importance measures from a group of SNPs or probes and outputs a p-value for each gene. The procedures builds upon the method described in <doi:10.1093/Bioinformatics/Bty373> and will be published soon.

Version: 1.0.0
Depends: R (≥ 3.3.1), EmpiricalBrownsMethod (≥ 1.6.0), Hmisc (≥ 4.1)
Imports: stats, ranger
Published: 2018-07-30
DOI: 10.32614/CRAN.package.poolVIM
Author: Stefano Nembrini
Maintainer: Stefano Nembrini <stefanonembrini at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
CRAN checks: poolVIM results

Documentation:

Reference manual: poolVIM.pdf

Downloads:

Package source: poolVIM_1.0.0.tar.gz
Windows binaries: r-devel: poolVIM_1.0.0.zip, r-release: poolVIM_1.0.0.zip, r-oldrel: poolVIM_1.0.0.zip
macOS binaries: r-release (arm64): poolVIM_1.0.0.tgz, r-oldrel (arm64): poolVIM_1.0.0.tgz, r-release (x86_64): poolVIM_1.0.0.tgz, r-oldrel (x86_64): poolVIM_1.0.0.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=poolVIM to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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