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phylorug: Visualize Clade Recovery and Support Across Phylogenetic Trees
Generates rug plot visualizations directly on tree nodes to
illustrate clade recovery and support from multiple phylogenetic and
phylogenomic analyses. As modern studies routinely employ diverse
datasets and inference techniques producing potentially conflicting
trees, 'phylorug' simplifies the comparison among these trees by
consolidating clade recovery and support on a reference tree.
| Version: |
0.1.0 |
| Depends: |
R (≥ 4.1.0) |
| Imports: |
ape, graphics, grDevices, phangorn, stats, tools, utils |
| Suggests: |
knitr, mockery, rmarkdown, testthat (≥ 3.0.0) |
| Published: |
2026-11-06 |
| DOI: |
10.32614/CRAN.package.phylorug |
| Author: |
Md Rifath Ahamed 
[aut, cre, cph],
J. Salvador Arias
[aut],
Sergei Tarasov
[aut] |
| Maintainer: |
Md Rifath Ahamed <rifathahamed777 at gmail.com> |
| BugReports: |
https://github.com/mdrifathahamed/phylorug/issues |
| License: |
MIT + file LICENSE |
| URL: |
https://github.com/mdrifathahamed/phylorug,
https://mdrifathahamed.github.io/phylorug/ |
| NeedsCompilation: |
no |
| Citation: |
phylorug citation info |
| Materials: |
README, NEWS |
| CRAN checks: |
phylorug results |
Documentation:
Downloads:
Linking:
Please use the canonical form
https://CRAN.R-project.org/package=phylorug
to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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