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permute: Functions for Generating Restricted Permutations of Data

A set of restricted permutation designs for freely exchangeable, line transects (time series), and spatial grid designs plus permutation of blocks (groups of samples) is provided. 'permute' also allows split-plot designs, in which the whole-plots or split-plots or both can be freely-exchangeable or one of the restricted designs. The 'permute' package is modelled after the permutation schemes of 'Canoco 3.1' (and later) by Cajo ter Braak.

Version: 0.9-7
Depends: R (≥ 2.14.0)
Imports: stats
Suggests: vegan (≥ 2.0-0), testthat (≥ 0.5), parallel, knitr, rmarkdown, bookdown, sessioninfo
Published: 2022-01-27
Author: Gavin L. Simpson ORCID iD [aut, cph, cre], R Core Team [cph], Douglas M. Bates [ctb], Jari Oksanen [ctb]
Maintainer: Gavin L. Simpson <ucfagls at gmail.com>
BugReports: https://github.com/gavinsimpson/permute/issues
License: GPL-2
Copyright: see file COPYRIGHTS
URL: https://github.com/gavinsimpson/permute
NeedsCompilation: no
Materials: README NEWS ChangeLog
CRAN checks: permute results

Documentation:

Reference manual: permute.pdf
Vignettes: Restricted permutations; using the permute package

Downloads:

Package source: permute_0.9-7.tar.gz
Windows binaries: r-devel: permute_0.9-7.zip, r-release: permute_0.9-7.zip, r-oldrel: permute_0.9-7.zip
macOS binaries: r-release (arm64): permute_0.9-7.tgz, r-oldrel (arm64): permute_0.9-7.tgz, r-release (x86_64): permute_0.9-7.tgz, r-oldrel (x86_64): permute_0.9-7.tgz
Old sources: permute archive

Reverse dependencies:

Reverse depends: indicspecies, Storm, vegan
Reverse imports: bipartite, brainGraph, bsseq, Clomial, codyn, iCAMP, LDM, MEAL, MiRKAT, mixAR, monoClust, npcure, NST, permuco, pRF, ProcMod, randomizationInference, rankdist, spaceNet, SYNCSA, text2map
Reverse suggests: BiodiversityR, ecostats, ggordiplots, MiscMetabar, pctax

Linking:

Please use the canonical form https://CRAN.R-project.org/package=permute to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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