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Several functions are provided to implement a MBPLSDA : components search, optimal model components number search, optimal model validity test by permutation tests, observed values evaluation of optimal model parameters and predicted categories, bootstrap values evaluation of optimal model parameters and predicted cross-validated categories. The use of this package is described in Brandolini-Bunlon et al (2019. Multi-block PLS discriminant analysis for the joint analysis of metabolomic and epidemiological data. Metabolomics, 15(10):134).
| Version: | 0.9.0 |
| Depends: | ade4, pROC |
| Imports: | MASS, parallel, doParallel, foreach, FactoMineR |
| Published: | 2022-06-20 |
| Author: | Marion Brandolini-Bunlon, Stephanie Bougeard, Melanie Petera, Estelle Pujos-Guillot |
| Maintainer: | Marion Brandolini-Bunlon <marion.brandolini-bunlon at inra.fr> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2.0)] |
| NeedsCompilation: | no |
| In views: | Omics |
| CRAN checks: | packMBPLSDA results |
| Reference manual: | packMBPLSDA.pdf |
| Package source: | packMBPLSDA_0.9.0.tar.gz |
| Windows binaries: | r-devel: packMBPLSDA_0.9.0.zip, r-release: packMBPLSDA_0.9.0.zip, r-oldrel: packMBPLSDA_0.9.0.zip |
| macOS binaries: | r-release (arm64): packMBPLSDA_0.9.0.tgz, r-oldrel (arm64): packMBPLSDA_0.9.0.tgz, r-release (x86_64): packMBPLSDA_0.9.0.tgz, r-oldrel (x86_64): packMBPLSDA_0.9.0.tgz |
| Old sources: | packMBPLSDA archive |
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These binaries (installable software) and packages are in development.
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