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Generates n hierarchical clustering hypotheses on subsets of classifiers (usually species in community ecology studies). The n clustering hypotheses are combined to generate a generalized cluster, and computes three metrics of support. 1) The average proportion of elements conforming the group in each of the n clusters (integrity). And 2) the contamination, i.e., the average proportion of elements from other groups that enter a focal group. 3) The probability of existence of the group gives the integrity and contamination in a Bayesian approach.
| Version: | 0.1.1 |
| Depends: | vegan, stringr, progress |
| Published: | 2024-08-16 |
| DOI: | 10.32614/CRAN.package.octopucs |
| Author: | Roger Guevara [aut, cre], Ian MacGregor-Fors [aut] |
| Maintainer: | Roger Guevara <roger.guevara at inecol.mx> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| Citation: | octopucs citation info |
| CRAN checks: | octopucs results |
| Reference manual: | octopucs.pdf |
| Package source: | octopucs_0.1.1.tar.gz |
| Windows binaries: | r-devel: octopucs_0.1.1.zip, r-release: octopucs_0.1.1.zip, r-oldrel: octopucs_0.1.1.zip |
| macOS binaries: | r-release (arm64): octopucs_0.1.1.tgz, r-oldrel (arm64): octopucs_0.1.1.tgz, r-release (x86_64): octopucs_0.1.1.tgz, r-oldrel (x86_64): octopucs_0.1.1.tgz |
| Old sources: | octopucs archive |
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