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nfcore.utils: Utilities for 'nf-core' Modules

Provides utility functions to facilitate the use of R within nf-core modules. The package helps parse 'Nextflow' inputs and perform validation checks to ensure correct parameter handling and reproducible execution. For more details see Ewels (2020) <doi:10.1038/s41587-020-0439-x>.

Version: 0.0.4
Depends: R (≥ 4.4.0)
Imports: utils
Suggests: testthat (≥ 3.0.0), rmarkdown, BiocStyle, knitr, withr, yaml
Published: 2026-06-22
DOI: 10.32614/CRAN.package.nfcore.utils (may not be active yet)
Author: nf-core Community [aut], Louis Le Nezet ORCID iD [aut, cre, cph]
Maintainer: Louis Le Nezet <louislenezet at gmail.com>
BugReports: https://github.com/nf-core/r-nf-core-utils/issues
License: MIT + file LICENSE
URL: https://github.com/nf-core/r-nf-core-utils
NeedsCompilation: no
Citation: nfcore.utils citation info
Materials: README, NEWS
CRAN checks: nfcore.utils results

Documentation:

Reference manual: nfcore.utils.html , nfcore.utils.pdf
Vignettes: R nf-core utils tutorial (source, R code)

Downloads:

Package source: nfcore.utils_0.0.4.tar.gz
Windows binaries: r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries: r-release (arm64): nfcore.utils_0.0.4.tgz, r-oldrel (arm64): nfcore.utils_0.0.4.tgz, r-release (x86_64): nfcore.utils_0.0.4.tgz, r-oldrel (x86_64): nfcore.utils_0.0.4.tgz

Linking:

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These binaries (installable software) and packages are in development.
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