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neuroSCC: Bridging Simultaneous Confidence Corridors and PET Neuroimaging

Tools for the structured processing of PET neuroimaging data in preparation for the estimation of Simultaneous Confidence Corridors (SCCs) for one-group, two-group, or single-patient vs group comparisons. The package facilitates PET image loading, data restructuring, integration into a Functional Data Analysis framework, contour extraction, identification of significant results, and performance evaluation. It bridges established packages (e.g., 'oro.nifti') with novel statistical methodologies (e.g., 'ImageSCC') and enables reproducible analysis pipelines, including comparison with Statistical Parametric Mapping ('SPM').

Version: 1.0.0
Depends: R (≥ 4.2.0)
Imports: contoureR, dplyr, graphics, memisc, oro.nifti, stats, tidyr, utils
Suggests: BPST, ImageSCC, knitr, rcmdcheck, remotes, rmarkdown, roxygen2 (≥ 7.1.0), Triangulation
Published: 2025-03-27
DOI: 10.32614/CRAN.package.neuroSCC
Author: Juan A. Arias Lopez ORCID iD [aut, cre, cph], Virgilio Gomez Rubio ORCID iD [rev], Pablo Aguiar Fernandez ORCID iD [ths], Andrew Haddon Kemp ORCID iD [ths]
Maintainer: Juan A. Arias Lopez <juanantonio.arias.lopez at usc.es>
BugReports: https://github.com/iguanamarina/neuroSCC/issues
License: MIT + file LICENSE
URL: https://iguanamarina.github.io/neuroSCC/, https://github.com/iguanamarina/PhD-2023-SCC-vs-SPM-Group-vs-Group, https://github.com/iguanamarina/PhD-2024-SCC-vs-SPM-SinglePatient-vs-Group
NeedsCompilation: no
Additional_repositories: https://iguanamarina.github.io/neuroSCC-drat
Materials: README NEWS
CRAN checks: neuroSCC results

Documentation:

Reference manual: neuroSCC.pdf
Vignettes: landing_vignette (source, R code)
one_vs_group (source, R code)
two_group_comparison (source, R code)

Downloads:

Package source: neuroSCC_1.0.0.tar.gz
Windows binaries: r-devel: neuroSCC_1.0.0.zip, r-release: neuroSCC_1.0.0.zip, r-oldrel: neuroSCC_1.0.0.zip
macOS binaries: r-release (arm64): neuroSCC_1.0.0.tgz, r-oldrel (arm64): neuroSCC_1.0.0.tgz, r-release (x86_64): neuroSCC_1.0.0.tgz, r-oldrel (x86_64): neuroSCC_1.0.0.tgz

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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