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mrbin: Metabolomics Data Analysis Functions

A collection of functions for processing and analyzing metabolite data. The namesake function mrbin() converts 1D or 2D Nuclear Magnetic Resonance data into a matrix of values suitable for further data analysis and performs basic processing steps in a reproducible way. Negative values, a common issue in such data, can be replaced by positive values (<doi:10.1021/acs.jproteome.0c00684>). All used parameters are stored in a readable text file and can be restored from that file to enable exact reproduction of the data at a later time. The function fia() ranks features according to their impact on classifier models, especially artificial neural network models.

Version: 1.7.4
Depends: R (≥ 2.10)
Imports: grDevices, graphics, stats, utils, methods
Suggests: parallel, keras
Published: 2023-04-11
Author: Matthias Klein ORCID iD [aut, cre]
Maintainer: Matthias Klein <matthias.s.klein at gmx.net>
License: GPL-3
URL: http://www.kleinomicslab.com/software/, https://github.com/kleinomicslab/mrbin
NeedsCompilation: no
Citation: mrbin citation info
Materials: README NEWS
CRAN checks: mrbin results

Documentation:

Reference manual: mrbin.pdf
Vignettes: mrbin

Downloads:

Package source: mrbin_1.7.4.tar.gz
Windows binaries: r-devel: mrbin_1.7.4.zip, r-release: mrbin_1.7.4.zip, r-oldrel: mrbin_1.7.4.zip
macOS binaries: r-release (arm64): mrbin_1.7.4.tgz, r-oldrel (arm64): mrbin_1.7.4.tgz, r-release (x86_64): mrbin_1.7.4.tgz, r-oldrel (x86_64): mrbin_1.7.4.tgz
Old sources: mrbin archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=mrbin to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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