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R package for Maximum likelihood analysis Of animal MovemENT behavior Using multivariate Hidden Markov Models
Get started with the vignette: Guide to using momentuHMM
The package is available at . To install it:
install.packages("momentuHMM")To install the latest (stable) version of the package from Github:
library(remotes)
install_github("bmcclintock/momentuHMM")To install the latest (unstable) version of the
package from Github: 
library(remotes)
install_github("bmcclintock/momentuHMM@develop")McClintock, B.T., Michelot, T. (2018) momentuHMM: R package for generalized hidden Markov models of animal movement. Methods in Ecology and Evolution, 9(6), 1518-1530.
McClintock, B.T., King R., Thomas L., Matthiopoulos J., McConnell B.J., Morales J.M. (2012) A general discrete-time modeling framework for animal movement using multistate random walks. Ecological Monographs, 82(3), 335-349.
McClintock, B.T. (2017) Incorporating telemetry error into hidden Markov models of animal movement using multiple imputation. Journal of Agricultural, Biological, and Environmental Statistics, 22(3), 249-269.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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