The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.
This vignette aims to showcase a use case when the user wants to download all the datasets of a data package using metajam
- download_d1_data_pkg
.
In this example we use a csv file storing packages returned after searching for soil bulk density
on Arctic Data Center and KNB data repositories.
# devtools::install_github("NCEAS/metajam")
library(metajam)
library(readr)
library(purrr)
# Directory to save the data set
"./Soil_bulk"
path_folder <-
# URL to read the search results stored as a csv on Google Drive
"https://drive.google.com/uc?export=download&id=1WTLP2BcXCXmUyv4kmntyhuPfrBNdPIqV" csv_search_results_url <-
# Create the local directory to store data sets
dir.create(path_folder, showWarnings = FALSE)
# Read the data listing from Google Drive: https://drive.google.com/open?id=1WTLP2BcXCXmUyv4kmntyhuPfrBNdPIqV
read_csv(csv_search_results_url)
data_listing <-
### Download the data and metadata ----
# Create the list of unique dois
unique(data_listing$identifier)
dois <-
# batch download the datasets
map(dois, ~download_d1_data_pkg(.x, path_folder)) data_folders <-
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.