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Flexibly implements Integral Projection Models using a mathematical(ish) syntax. This package will not help with the vital rate modeling process, but will help convert those regression models into an IPM. 'ipmr' handles density dependence and environmental stochasticity, with a couple of options for implementing the latter. In addition, provides functions to avoid unintentional eviction of individuals from models. Additionally, provides model diagnostic tools, plotting functionality, stochastic/deterministic simulations, and analysis tools. Integral projection models are described in depth by Easterling et al. (2000) <doi:10.1890/0012-9658(2000)081[0694:SSSAAN]2.0.CO;2>, Merow et al. (2013) <doi:10.1111/2041-210X.12146>, Rees et al. (2014) <doi:10.1111/1365-2656.12178>, and Metcalf et al. (2015) <doi:10.1111/2041-210X.12405>. Williams et al. (2012) <doi:10.1890/11-2147.1> discuss the problem of unintentional eviction.
Version: | 0.0.7 |
Depends: | R (≥ 3.4) |
Imports: | graphics, grDevices, magrittr, methods, purrr (≥ 0.3.0), rlang (≥ 0.3.0), stats, utils, Rcpp |
LinkingTo: | Rcpp |
Suggests: | covr, knitr, lme4, mvtnorm, rmarkdown, roxygen2, spelling, testthat, tools |
Published: | 2023-02-16 |
DOI: | 10.32614/CRAN.package.ipmr |
Author: | Sam Levin |
Maintainer: | Sam Levin <levisc8 at gmail.com> |
BugReports: | https://github.com/padrinoDB/ipmr/issues |
License: | MIT + file LICENSE |
URL: | https://padrinoDB.github.io/ipmr/, https://github.com/padrinoDB/ipmr |
NeedsCompilation: | yes |
Language: | en-US |
Citation: | ipmr citation info |
Materials: | NEWS |
CRAN checks: | ipmr results |
Reference manual: | ipmr.pdf |
Vignettes: |
Age-Size IPMs Density Dependent IPMs General IPMs Index Notation in ipmr Introduction to ipmr proto_ipm Data Structure |
Package source: | ipmr_0.0.7.tar.gz |
Windows binaries: | r-devel: ipmr_0.0.7.zip, r-release: ipmr_0.0.7.zip, r-oldrel: ipmr_0.0.7.zip |
macOS binaries: | r-release (arm64): ipmr_0.0.7.tgz, r-oldrel (arm64): ipmr_0.0.7.tgz, r-release (x86_64): ipmr_0.0.7.tgz, r-oldrel (x86_64): ipmr_0.0.7.tgz |
Old sources: | ipmr archive |
Reverse depends: | Rpadrino |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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