The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.
Integration of disparate datasets is needed in order to make efficient use of all available data and thereby address the issues currently threatening biodiversity. Data integration is a powerful modeling framework which allows us to combine these datasets together into a single model, yet retain the strengths of each individual dataset. We therefore introduce the package, 'intSDM': an R package designed to help ecologists develop a reproducible workflow of integrated species distribution models, using data both provided from the user as well as data obtained freely online. An introduction to data integration methods is discussed in Issac, Jarzyna, Keil, Dambly, Boersch-Supan, Browning, Freeman, Golding, Guillera-Arroita, Henrys, Jarvis, Lahoz-Monfort, Pagel, Pescott, Schmucki, Simmonds and O’Hara (2020) <doi:10.1016/j.tree.2019.08.006>.
| Version: | 2.1.0 |
| Depends: | R (≥ 3.5), ggplot2, terra, sf, stats, PointedSDMs (≥ 2.1.0), methods |
| Imports: | R6, geodata, inlabru (≥ 2.3.1), giscoR, blockCV, rgbif, tidyterra |
| Suggests: | viridis, INLA (≥ 21.08.31), ggpolypath, R.utils, lwgeom, spatstat, RColorBrewer, knitr, rmarkdown, testthat (≥ 3.0.0) |
| Published: | 2024-08-21 |
| DOI: | 10.32614/CRAN.package.intSDM |
| Author: | Philip Mostert [aut, cre], Angeline Bruls [aut], Ragnhild {Bjørkås} [aut], Wouter Koch [aut], Ellen Martin [aut] |
| Maintainer: | Philip Mostert <philip.s.mostert at ntnu.no> |
| License: | GPL (≥ 3) |
| NeedsCompilation: | no |
| Additional_repositories: | https://inla.r-inla-download.org/R/testing/ |
| Materials: | README NEWS |
| CRAN checks: | intSDM results |
| Reference manual: | intSDM.pdf |
| Vignettes: |
PennsylvaniaWarbler (source, R code) Example creating a reproducible workflow for red listed vascular plants (source, R code) RichnessModel (source, R code) |
| Package source: | intSDM_2.1.0.tar.gz |
| Windows binaries: | r-devel: intSDM_2.1.0.zip, r-release: intSDM_2.1.0.zip, r-oldrel: intSDM_2.1.0.zip |
| macOS binaries: | r-release (arm64): intSDM_2.1.0.tgz, r-oldrel (arm64): intSDM_2.1.0.tgz, r-release (x86_64): intSDM_2.1.0.tgz, r-oldrel (x86_64): intSDM_2.1.0.tgz |
| Old sources: | intSDM archive |
Please use the canonical form https://CRAN.R-project.org/package=intSDM to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.