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init_start
and other functions with
start = 'rds_perm_bari'
and
start = 'rds_from_sim_start'
will now work correctly.gm
to
better explain the list elements that are components of
graphMatch
class.igraph::upgrade_graph
on the Enron and C.Elegans
data.nnodes
to integer in
identity_match
function.graph_match_
functions have been consolidated into
one function called gm
that takes a method argument
indicating which of the methods to use. This will break pretty much any
code but was instituted to improve flexibility and extensibility going
forward. The returned values for these functions should be relatively
consistent with the older values except that they’ll have a lot more
functionality through the graphMatch
class.get_perm
is now called get_perm_mat
and is
more flexible, taking a graph match object.match_report
, edge_match_info
,
match_plot_igraph
, match_plot_matrix
,
matched_adjs
. Instead use methods associated with
graphMatch
class such as summary
,
plot
, %*%
etc.sample_correlated_rdpg
is now
sample_correlated_rdpg_pair
.lapjv
and lapmod
functions are now
accessed solely through do_lap
.init_start
.best_matches
.sample_*_with_junk
functions are removed. Instead use
the normal sample_*
functions with the ncore
parameter.gm_expand_when_stuck
is removed and can be accessed by
specifying ExpandWhenStuck = TRUE
when calling
gm
with method = "percolation"
.bari_start
, edge_match_info
,
get_perm
, gm_indefinite
,
graph_match_ExpandWhenStuck
, graph_match_FW
,
graph_match_IsoRank
, graph_match_PATH
,
graph_match_Umeyama
, graph_match_convex
,
graph_match_percolation
, lapjv
,
lapmod
, match_plot_igraph
,
match_plot_matrix
, match_report
,
matched_adjs
, rds_from_sim_start
,
rds_perm_bari_start
, rds_sinkhorn_start
,
row_cor
, row_diff
, row_perm_stat
,
rperm
,
sample_correlated_gnp_pair_w_junk
,sample_correlated_sbm_pair_w_junk
,graphMatch
class for inspecting and using
matches.as.graphMatch
can convert data.frames and matrices to
the graphMatch
class.method
argument in gm
can also take a
function so that you can leverage the graph_match
class and
error checking of gm
.best_matches
will compute precision at k if given the
true labels.largest_cc
for finding largest
connected component.check_graph
function is now exported to prepare
graphs outside of gm
functions.matrix_list
s can now be named lists.NEWS.md
file to track changes to the
package.These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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