The hardware and bandwidth for this mirror is donated by dogado GmbH, the Webhosting and Full Service-Cloud Provider. Check out our Wordpress Tutorial.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]dogado.de.

hypergate: Machine Learning of Hyperrectangular Gating Strategies for High-Dimensional Cytometry

Given a high-dimensional dataset that typically represents a cytometry dataset, and a subset of the datapoints, this algorithm outputs an hyperrectangle so that datapoints within the hyperrectangle best correspond to the specified subset. In essence, this allows the conversion of clustering algorithms' outputs to gating strategies outputs.

Version: 0.8.5
Depends: R (≥ 3.5.0)
Imports: stats, grDevices, utils, graphics
Suggests: knitr, rmarkdown, flowCore, sp, sf
Published: 2024-01-16
Author: Etienne Becht [cre, aut], Samuel Granjeaud [ctb]
Maintainer: Etienne Becht <etienne.becht at protonmail.com>
License: GPL-3
NeedsCompilation: no
Materials: README
CRAN checks: hypergate results

Documentation:

Reference manual: hypergate.pdf
Vignettes: Hypergate

Downloads:

Package source: hypergate_0.8.5.tar.gz
Windows binaries: r-devel: hypergate_0.8.5.zip, r-release: hypergate_0.8.5.zip, r-oldrel: hypergate_0.8.5.zip
macOS binaries: r-release (arm64): hypergate_0.8.5.tgz, r-oldrel (arm64): hypergate_0.8.5.tgz, r-release (x86_64): hypergate_0.8.5.tgz, r-oldrel (x86_64): hypergate_0.8.5.tgz
Old sources: hypergate archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=hypergate to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.