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r
is used to compute enrichment score (credit to Michael from Berkeley).list
of character
vectors, named by GO term, of genes associated with each term - can be loaded with data(GO_gene_sets)
[based on Gene Ontology (2015-11-27) and human GO annotations file validated on 07/08/2016]).S
argument of gset
is interpreted when vector of scores r
is supplied - now instead of the scores for S
being those at the corresponding ranks in r
, they are those at corresponding indices. For example, in version 1.0 the scores for S=1:3
would be the top 3 scores in r
, however now it be the those of the first 3 elements of r
. Behaviour has not changed for when S
is character
or when N
is used instead of r
.These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.