To cite the 'gllvm' package in publications use:

Niku J, Brooks W, Herliansyah R, Hui FKC, Korhonen P, Taskinen S, van der Veen B, Warton DI (2024). gllvm: Generalized Linear Latent Variable Models. R package version 2.0.

accompanied by any of associated research articles, as applicable:

Niku J, Hui FKC, Taskinen S, Warton DI (2019). “gllvm - Fast analysis of multivariate abundance data with generalized linear latent variable models in R.” Methods in Ecology and Evolution, 10, 2173-2182.

Niku J, Hui FKC, Taskinen S, Warton DI (2021). “Analyzing environmental-trait interactions in ecological communities with fourth-corner latent variable models.” Environmetrics, 32, 1-17.

van der Veen B, O'Hara RB (2024). “Fast fitting of phylogenetic mixed effects models.” arxiv.

van der Veen B, Hui FKC, Hovstad KA, Solbu EB, O'Hara RB (2021). “Model-based ordination for species with unequal niche widths.” Methods in Ecology and Evolution, 12, 1288-1300.

van der Veen B, Hui FKC, Hovstad KA, O'Hara RB (2023). “Concurrent ordination: Simultaneous unconstrained and constrained latent variable modelling.” Methods in Ecology and Evolution, 14, 683-695.

Korhonen P, Hui FKC, Niku J, Taskinen S (2023). “Fast and universal estimation of latent variable models using extended variational approximations.” Statistics and Computing, 33, 1-16.

Corresponding BibTeX entries:

  @Manual{,
    title = {gllvm: Generalized Linear Latent Variable Models},
    author = {Jenni Niku and Wesley Brooks and Riki Herliansyah and
      Francis K. C. Hui and Pekka Korhonen and Sara Taskinen and Bert
      {van der Veen} and David I. Warton},
    year = {2024},
    note = {R package version 2.0},
  }

  @Article{,
    title = {gllvm - Fast analysis of multivariate abundance data with
      generalized linear latent variable models in R},
    author = {Jenni Niku and Francis K. C. Hui and Sara Taskinen and
      David I. Warton},
    journal = {Methods in Ecology and Evolution},
    year = {2019},
    volume = {10},
    pages = {2173-2182},
  }

  @Article{,
    title = {Analyzing environmental-trait interactions in ecological
      communities with fourth-corner latent variable models},
    author = {Jenni Niku and Francis K. C. Hui and Sara Taskinen and
      David I. Warton},
    journal = {Environmetrics},
    year = {2021},
    volume = {32},
    pages = {1-17},
  }

  @Article{,
    title = {Fast fitting of phylogenetic mixed effects models},
    author = {Bert {van der Veen} and Robert B. O'Hara},
    journal = {arxiv},
    year = {2024},
  }

  @Article{,
    title = {Model-based ordination for species with unequal niche
      widths},
    author = {Bert {van der Veen} and Francis K. C. Hui and Knut A.
      Hovstad and Erik B. Solbu and Robert B. O'Hara},
    journal = {Methods in Ecology and Evolution},
    year = {2021},
    volume = {12},
    pages = {1288-1300},
  }

  @Article{,
    title = {Concurrent ordination: Simultaneous unconstrained and
      constrained latent variable modelling},
    author = {Bert {van der Veen} and Francis K. C. Hui and Knut A.
      Hovstad and Robert B. O'Hara},
    journal = {Methods in Ecology and Evolution},
    year = {2023},
    volume = {14},
    pages = {683-695},
  }

  @Article{,
    title = {Fast and universal estimation of latent variable models
      using extended variational approximations},
    author = {Pekka Korhonen and Francis K. C. Hui and Jenni Niku and
      Sara Taskinen},
    journal = {Statistics and Computing},
    year = {2023},
    volume = {33},
    pages = {1-16},
  }