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Calculates additive and dominance genetic relationship matrices and their inverses, in matrix and tabular-sparse formats. It includes functions for checking and processing pedigree, calculating inbreeding coefficients (Meuwissen & Luo, 1992 <doi:10.1186/1297-9686-24-4-305>), as well as functions to calculate the matrix of genetic group contributions (Q), and adding those contributions to the genetic merit of animals (Quaas (1988) <doi:10.3168/jds.S0022-0302(88)79691-5>). Calculation of Q is computationally extensive. There are computationally optimized functions to calculate Q.
Version: | 2.1.2 |
Suggests: | doParallel (≥ 1.0.14), foreach (≥ 1.4.4) |
Published: | 2022-03-27 |
DOI: | 10.32614/CRAN.package.ggroups |
Author: | Mohammad Ali Nilforooshan [aut, cre] |
Maintainer: | Mohammad Ali Nilforooshan <m.a.nilforooshan at gmail.com> |
BugReports: | https://github.com/nilforooshan/ggroups/issues |
License: | GPL-3 |
URL: | https://github.com/nilforooshan/ggroups |
NeedsCompilation: | no |
Materials: | README NEWS |
CRAN checks: | ggroups results |
Reference manual: | ggroups.pdf |
Package source: | ggroups_2.1.2.tar.gz |
Windows binaries: | r-devel: ggroups_2.1.2.zip, r-release: ggroups_2.1.2.zip, r-oldrel: ggroups_2.1.2.zip |
macOS binaries: | r-release (arm64): ggroups_2.1.2.tgz, r-oldrel (arm64): ggroups_2.1.2.tgz, r-release (x86_64): ggroups_2.1.2.tgz, r-oldrel (x86_64): ggroups_2.1.2.tgz |
Old sources: | ggroups archive |
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These binaries (installable software) and packages are in development.
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