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geom_subgene_arrow() and
geom_subgene_label() now support polar coordinates.coord_polar() as a
supported feature rather than as experimental (#115, #116, #117,
#122).ggplot2 (>= 3.4.0) for the linewidth
aesthetic, rlang (>= 1.0.0) for
rlang::caller_arg(), and
ggfittext (>= 0.9.0) for polar-coordinate text fitting
(#107).geom_feature() and geom_terminator() now
document that their linewidth is expressed in points rather
than millimetres, unlike geom_gene_arrow() and the ggplot2
convention; this inconsistency will be reconciled when these geoms are
superseded in gggenes 1.0.0 (#121).geom_feature_label() now draws when the
forward aesthetic is not mapped (#98).geom_feature_label() now sizes the label box of a
forward = TRUE feature to the full panel in polar
coordinates, spanning to the theta edge at 2 * pi rather
than to 1 radian (#112).geom_feature_label() and
geom_terminator_label() now draw on the opposite side of
the molecule with a negative feature_height or
terminator_height, and their height-parameter documentation
is clarified (#90, #99).geom_gene_arrow(), geom_subgene_arrow(),
geom_feature(), and geom_terminator() now
handle the deprecated size aesthetic consistently, each
emitting a single deprecation warning (#102).geom_gene_arrow() and geom_subgene_arrow()
legend keys now apply alpha to the outline colour as well
as the fill, matching the drawn geoms (#101).geom_gene_label() and geom_subgene_label()
register the align parameter explicitly (#104).geom_subgene_label() now draws in polar coordinates
with only its required aesthetics mapped, without also needing
xmin/xmax (#106).make_alignment_dummies() now gives a more informative
error when on is absent from the mapped id
column (#119).geom_terminator() and
geom_terminator_label()size aesthetic in favour of
linewidth (size deprecated as of ggplot2
3.4.0)geom_feature() and
geom_feature_label()coord_flip()
(#38)forward value to logical, more
useful values for the forward aesthetic in example data, and fix an
error in README and introductory vignette (-1 does not coerce to
FALSE…)id values in
make_alignment_dummies() (#51, thanks
element_line to use linewidth
rather than size (size deprecated as of
ggplot2 3.4.0)height argument to
geom_gene_label() and geom_subgene_label()
were being ignored (#40, thanks @jvanbelzen)forward aesthetic in the
README and example_genes (thanks @rickbeeloo)example_subgenes and
correct some errors in the documentation for both example data
framesgeom_subgene_arrow() (contributed by @zdk123)geom_subgene_label()expect_error with the more reliable
expect_silent in testsgeom_gene_arrow() now supports forward
aesthetic (#3 and #5, thanks @adomingues and @jasonserviss)geom_gene_label() added (#3, thanks @adomingues)aes()geom_gene_arrow()These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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