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thmm() fits topological hidden Markov models with
Brownian motion with drift (including fractional Brownian motion),
Ornstein-Uhlenbeck and non-parametric emission models; Baum-Welch and
Viterbi are implemented in C.rthmm(), rbm(), rou(),
rbridge() and rmarkov() simulate data.predict(), plot(),
simulate(), logLik() and coef()
methods for fitted models, and ari() for comparing state
sequences.These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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