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A method which uses the Cochran-Mantel-Haenszel test with significant pattern mining to detect intervals in binary genotype data which are significantly associated with a particular phenotype, while accounting for categorical covariates.
| Version: | 0.2.7 |
| Depends: | R (≥ 3.3.0), bindata |
| Imports: | Rcpp |
| LinkingTo: | Rcpp |
| Suggests: | testthat |
| Published: | 2016-09-13 |
| DOI: | 10.32614/CRAN.package.fastcmh |
| Author: | Felipe Llinares Lopez, Dean Bodenham |
| Maintainer: | Dean Bodenham <deanbodenhambsse at gmail.com> |
| License: | GPL-2 | GPL-3 |
| NeedsCompilation: | yes |
| SystemRequirements: | C++11 |
| CRAN checks: | fastcmh results |
| Reference manual: | fastcmh.pdf |
| Package source: | fastcmh_0.2.7.tar.gz |
| Windows binaries: | r-devel: fastcmh_0.2.7.zip, r-release: fastcmh_0.2.7.zip, r-oldrel: fastcmh_0.2.7.zip |
| macOS binaries: | r-release (arm64): fastcmh_0.2.7.tgz, r-oldrel (arm64): fastcmh_0.2.7.tgz, r-release (x86_64): fastcmh_0.2.7.tgz, r-oldrel (x86_64): fastcmh_0.2.7.tgz |
| Old sources: | fastcmh archive |
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