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epidm: UK Epidemiological Data Management

Contains utilities and functions for the cleaning, processing and management of patient level public health data for surveillance and analysis held by the UK Health Security Agency, UKHSA.

Version: 1.0.6
Depends: R (≥ 4.4.0)
Imports: data.table, DBI, odbc, phonics, purrr, readr, stats, stringi, stringr, utils, lubridate
Suggests: knitr, rmarkdown, testthat (≥ 3.0.0), patrick, ggplot2, dplyr, tibble
Published: 2026-02-25
DOI: 10.32614/CRAN.package.epidm
Author: Alice Graham ORCID iD [aut], Harshana Liyanage ORCID iD [aut], Frederick Sloots ORCID iD [aut, cre], Emma Parker ORCID iD [aut], Alex Bhattacharya [aut]
Maintainer: Frederick Sloots <frederick.sloots at ukhsa.gov.uk>
BugReports: https://github.com/ukhsa-collaboration/epidm/issues
License: GPL (≥ 3)
URL: https://github.com/ukhsa-collaboration/epidm
NeedsCompilation: no
Materials: README, NEWS
In views: Epidemiology
CRAN checks: epidm results

Documentation:

Reference manual: epidm.html , epidm.pdf
Vignettes: Guide: Staged Patient Matching and Time-based Episode Grouping with EpiDM (source, R code)

Downloads:

Package source: epidm_1.0.6.tar.gz
Windows binaries: r-devel: epidm_1.0.6.zip, r-release: epidm_1.0.6.zip, r-oldrel: epidm_1.0.6.zip
macOS binaries: r-release (arm64): epidm_1.0.6.tgz, r-oldrel (arm64): epidm_1.0.6.tgz, r-release (x86_64): epidm_1.0.6.tgz, r-oldrel (x86_64): epidm_1.0.6.tgz
Old sources: epidm archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=epidm to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.