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eHDPrep: Quality Control and Semantic Enrichment of Datasets

A tool for the preparation and enrichment of health datasets for analysis (Toner et al. (2023) <doi:10.1093/gigascience/giad030>). Provides functionality for assessing data quality and for improving the reliability and machine interpretability of a dataset. 'eHDPrep' also enables semantic enrichment of a dataset where metavariables are discovered from the relationships between input variables determined from user-provided ontologies.

Version: 1.3.3
Depends: R (≥ 3.6.0)
Imports: ggplot2 (≥ 3.3.3), dplyr (≥ 1.1.0), forcats (≥ 0.5.0), stringr (≥ 1.4.0), purrr (≥ 0.3.4), tidyr (≥ 1.1.2), kableExtra (≥ 1.3.1), magrittr (≥ 2.0.1), tibble (≥ 3.0.5), scales (≥ 1.1.1), rlang (≥ 0.4.10), quanteda (≥ 2.1.2), tm (≥ 0.7-8), pheatmap (≥ 1.0.12), igraph (≥ 1.2.6), tidygraph (≥ 1.2.0), readr (≥ 1.4.0), readxl (≥ 1.3.1), knitr (≥ 1.31)
Suggests: testthat (≥ 2.1.0), ggraph (≥ 2.0.5)
Published: 2023-06-05
DOI: 10.32614/CRAN.package.eHDPrep
Author: Tom Toner ORCID iD [aut], Ian Overton ORCID iD [aut, cre]
Maintainer: Ian Overton <I.Overton at qub.ac.uk>
BugReports: https://github.com/overton-group/eHDPrep/issues
License: GPL-3
URL: https://github.com/overton-group/eHDPrep
NeedsCompilation: no
Citation: eHDPrep citation info
Materials: NEWS
CRAN checks: eHDPrep results

Documentation:

Reference manual: eHDPrep.pdf
Vignettes: Introduction to eHDPrep

Downloads:

Package source: eHDPrep_1.3.3.tar.gz
Windows binaries: r-devel: eHDPrep_1.3.3.zip, r-release: eHDPrep_1.3.3.zip, r-oldrel: eHDPrep_1.3.3.zip
macOS binaries: r-release (arm64): eHDPrep_1.3.3.tgz, r-oldrel (arm64): eHDPrep_1.3.3.tgz, r-release (x86_64): eHDPrep_1.3.3.tgz, r-oldrel (x86_64): eHDPrep_1.3.3.tgz
Old sources: eHDPrep archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=eHDPrep to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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