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goi(): Goodness of Interpretability (GoI) index
measuring how well the E2Tree-estimated proximity matrix reconstructs
the original ensemble proximity matrix.goi_perm(): Permutation test for the GoI index to
assess statistical significance.goi_analysis(): Combined GoI analysis returning both
the observed statistic and permutation results.plot.goi_perm(): Plot method for goi_perm
objects displaying the permutation distribution.plot_e2tree_vis(): Interactive E2Tree visualization
using visNetwork with draggable nodes, zoom/pan, and
multiple layout options.plot_e2tree_click(): Interactive E2Tree plot in the R
graphics device with click-to-inspect node details.save_e2tree_html(): Save an interactive
visNetwork tree plot as a standalone HTML file.print_e2tree_summary(): Print a formatted summary of an
e2tree object.createDisMatrix: C++ backend
(CoOccurrences.cpp) with OpenMP thread-level parallelism
replaces the R-level foreach/doParallel loop;
co-occurrence normalization also moved to C++.e2tree: vectorized Wt computation using
vapply; simplified internal get_classes
helper.ePredTree: split rules are now pre-parsed once
(parse_all_splits + apply_split_rule),
eliminating repeated regex/eval(parse()) calls
during prediction.vimp: three group_by operations
consolidated into one; eval/parse
removed.split: ordSplit and catSplit
vectorized with outer().eImpurity: single-step integer matrix conversion.NumericVector +
static_cast<int>) for ranger compatibility (ranger
returns double columns for tree node assignments).ePredTree returning character instead of double
for regression trees.filter() call in
proximity_longer.R causing namespace conflict with
dplyr.NAMESPACE imports for
graphics, grDevices, and
utils.aaa_utils.R with shared internal helpers:
e2_variance(), get_ensemble_type(),
check_package().eValidation, eImpurity, and
eStoppingRules for consistency and performance.NEWS.md file to track changes to the
package.These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.