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douconca 1.2.2
- New coef.dcca() and fitted.dcca() functions with predict.dcca()
adapted. The function coef() can give fourth-corner correlations and
regression coefficients.
- Patch release with extended test files and associated small
corrections, for example, SDS (standard deviation of predictors) was in
v1.2.1 a constant factor too large with the default of the argument
divideBySiteTotals (the regression weights and t-values were
correct).
douconca 1.2.1
- Patch release addressing check errors on several CRAN build
machines.
douconca 1.2.0
douconca 1.1.6
- An issue with collinear predictors in v1.1.5 has been resolved.
douconca 1.1.5
- The package can now do general dc-CA, instead of the vegan-based
version with equal site weights only. For users of the previous version,
the function dc_CA_vegan has been replaced by the more general function
dc_CA. The default gives the same analysis. By specifying the argument
divideBySiteTotals = FALSE
, obtain the original dc-CA
analysis with unequal site weights.
- The
plot_dcCA
function is now a method:
plot.
- General dc-CA required weighted redundancy analysis. For this, a new
function
wrda
has been added, with methods for print,
scores and anova.
- A
predict
function has been added.
- A dc-CA can be computed from community-weighted means (CWMs) with
trait and environment data with species and site weights. See the new
function
fCWM_SNC
. This is of interest, for example, to
make a dc-CA analysis reproducible when the abundance data cannot be
made public, and it may also allow to perform dcCA with intra-species
trait variation. The user needs to be able to compute meaningful CWMs in
this case and supply trait data that reflect the (species-weighted)
inter-trait covariance.
- Several functions are updated. In particular, there are corrections
to the anova function.
douconca 1.1.2
- The
scores.dccav
function is corrected concerning
intra-set correlations for traits and environmental variables.
- The plotting functions are updated to avoid ggplot2 warnings on
color and size.
- The fitted straight lines in the plots use the implicit weights
(they did already, but the help said they did not).
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
Health stats visible at Monitor.