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In tumor tissue, underlying genomic instability can lead to DNA copy number alterations, e.g., copy number gains or losses. Sporadic copy number alterations occur randomly throughout the genome, whereas recurrent alterations are observed in the same genomic region across multiple independent samples, perhaps because they provide a selective growth advantage. This package implements the DiNAMIC procedure for assessing the statistical significance of recurrent DNA copy number aberrations (Bioinformatics (2011) 27(5) 678 - 685).
Version: | 1.0.1 |
Depends: | R (≥ 4.2.0) |
Suggests: | R.rsp |
Published: | 2024-03-15 |
DOI: | 10.32614/CRAN.package.dinamic |
Author: | Vonn Walter [aut, cre], Andrew B. Nobel [aut], Fred A. Wright [aut] |
Maintainer: | Vonn Walter <vwalter1 at pennstatehealth.psu.edu> |
License: | GPL-3 |
NeedsCompilation: | no |
Materials: | README NEWS |
CRAN checks: | dinamic results |
Reference manual: | dinamic.pdf |
Package source: | dinamic_1.0.1.tar.gz |
Windows binaries: | r-devel: dinamic_1.0.1.zip, r-release: dinamic_1.0.1.zip, r-oldrel: dinamic_1.0.1.zip |
macOS binaries: | r-release (arm64): dinamic_1.0.1.tgz, r-oldrel (arm64): dinamic_1.0.1.tgz, r-release (x86_64): dinamic_1.0.1.tgz, r-oldrel (x86_64): dinamic_1.0.1.tgz |
Old sources: | dinamic archive |
Reverse imports: | DiNAMIC.Duo |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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