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Implements an anomaly detection algorithm based on a dataset's mutual reachability minimum spanning tree: 'deadwood' prunes protruding tree segments and marks small debris as outliers; see Gagolewski (2026) <https://deadwood.gagolewski.com/>. More precisely, tree edges with weights greater than the detected elbow point are removed. All the resulting connected components whose sizes do not exceed a prespecified threshold are deemed anomalous. The use of a mutual reachability distance pulls peripheral observations farther away from one another. If the dataset is comprised of well-separated clusters of heterogeneous densities, an attempt to split the dataset and refine the outlierness markers will be made. The 'Python' version of 'deadwood' is available via 'PyPI'.
| Version: | 0.9.2 |
| Imports: | Rcpp, quitefastmst |
| LinkingTo: | Rcpp |
| Suggests: | datasets |
| Published: | 2026-10-01 |
| DOI: | 10.32614/CRAN.package.deadwood |
| Author: | Marek Gagolewski |
| Maintainer: | Marek Gagolewski <marek at gagolewski.com> |
| BugReports: | https://github.com/gagolews/deadwood/issues |
| License: | AGPL-3 |
| URL: | https://deadwood.gagolewski.com/, https://github.com/gagolews/deadwood |
| NeedsCompilation: | yes |
| SystemRequirements: | OpenMP |
| Materials: | NEWS |
| CRAN checks: | deadwood results |
| Reference manual: | deadwood.html , deadwood.pdf |
| Package source: | deadwood_0.9.2.tar.gz |
| Windows binaries: | r-devel: deadwood_0.9.1.zip, r-release: deadwood_0.9.0-3.zip, r-oldrel: deadwood_0.9.2.zip |
| macOS binaries: | r-release (arm64): deadwood_0.9.2.tgz, r-oldrel (arm64): deadwood_0.9.2.tgz, r-release (x86_64): deadwood_0.9.2.tgz, r-oldrel (x86_64): deadwood_0.9.2.tgz |
| Old sources: | deadwood archive |
| Reverse imports: | genieclust, lumbermark |
| Reverse suggests: | evoFE |
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