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countsplit: Splitting a Count Matrix into Independent Folds

Implements the count splitting methodology from Neufeld et al. (2022) <doi:10.1093/biostatistics/kxac047> and Neufeld et al. (2023) <doi:10.48550/arXiv.2307.12985>. Intended for turning a matrix of single-cell RNA sequencing counts, or similar count datasets, into independent folds that can be used for training/testing or cross validation. Assumes that the entries in the matrix are from a Poisson or a negative binomial distribution.

Version: 4.0.0
Depends: R (≥ 2.10)
Imports: Matrix, methods, Rcpp
LinkingTo: Rcpp
Suggests: knitr, rmarkdown
Published: 2023-08-24
DOI: 10.32614/CRAN.package.countsplit
Author: Anna Neufeld [aut, cre, cph], Mischko Heming [ctb], Joshua Popp [ctb]
Maintainer: Anna Neufeld <aneufeld at fredhutch.org>
BugReports: https://github.com/anna-neufeld/countsplit/issues
License: MIT + file LICENSE
URL: https://github.com/anna-neufeld/countsplit
NeedsCompilation: yes
Materials: README NEWS
CRAN checks: countsplit results

Documentation:

Reference manual: countsplit.pdf

Downloads:

Package source: countsplit_4.0.0.tar.gz
Windows binaries: r-devel: countsplit_4.0.0.zip, r-release: countsplit_4.0.0.zip, r-oldrel: countsplit_4.0.0.zip
macOS binaries: r-release (arm64): countsplit_4.0.0.tgz, r-oldrel (arm64): countsplit_4.0.0.tgz, r-release (x86_64): countsplit_4.0.0.tgz, r-oldrel (x86_64): countsplit_4.0.0.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=countsplit to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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