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countfitteR: Comprehensive Automatized Evaluation of Distribution Models for
Count Data
A large number of measurements generate count data. This is a statistical data type
that only assumes non-negative integer values and is generated by counting. Typically, counting
data can be found in biomedical applications, such as the analysis of DNA double-strand breaks.
The number of DNA double-strand breaks can be counted in individual cells using various
bioanalytical methods. For diagnostic applications, it is relevant to record the distribution of
the number data in order to determine their biomedical significance (Roediger, S. et al., 2018.
Journal of Laboratory and Precision Medicine. <doi:10.21037/jlpm.2018.04.10>). The software
offers functions for a comprehensive automated evaluation of distribution models of count
data. In addition to programmatic interaction, a graphical user interface (web server)
is included, which enables fast and interactive data-scientific analyses. The user is supported
in selecting the most suitable counting distribution for his own data set.
| Version: |
1.4 |
| Imports: |
ggplot2, MASS, shiny, stats, pscl, tools, utils |
| Suggests: |
dplyr, DT, gridExtra, knitr, pander, reshape2, rmarkdown, shinythemes, shinycssloaders, shinyWidgets, spelling, testthat |
| Published: |
2020-09-30 |
| DOI: |
10.32614/CRAN.package.countfitteR |
| Author: |
Jaroslaw Chilimoniuk
 [cre, ctb],
Alicja Gosiewska
[ctb],
Jadwiga Słowik
[ctb],
Michal Burdukiewicz
[aut],
Stefan Roediger
[ctb] |
| Maintainer: |
Jaroslaw Chilimoniuk <jaroslaw.chilimoniuk at gmail.com> |
| BugReports: |
https://github.com/BioGenies/countfitteR/issues |
| License: |
GPL-3 |
| URL: |
https://github.com/BioGenies/countfitteR |
| NeedsCompilation: |
no |
| Language: |
en-US |
| Citation: |
countfitteR citation info |
| Materials: |
README |
| CRAN checks: |
countfitteR results |
Documentation:
Downloads:
Linking:
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https://CRAN.R-project.org/package=countfitteR
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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