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A method for modeling genetic data as a combination of discrete layers, within each of which relatedness may decay continuously with geographic distance. This package contains code for running analyses (which are implemented in the modeling language 'rstan') and visualizing and interpreting output. See the paper for more details on the model and its utility.
| Version: | 1.0.6 |
| Depends: | R (≥ 3.4.0), Rcpp (≥ 0.12.0), methods |
| Imports: | rstan (≥ 2.26.0), rstantools (≥ 1.5.0), caroline, gtools, foreach, parallel, doParallel |
| LinkingTo: | StanHeaders (≥ 2.26.0), rstan (≥ 2.26.0), BH (≥ 1.66.0), Rcpp (≥ 0.12.0), RcppEigen (≥ 0.3.3.3.0), RcppParallel (≥ 5.0.1) |
| Suggests: | knitr, rmarkdown, maps |
| Published: | 2024-01-08 |
| DOI: | 10.32614/CRAN.package.conStruct |
| Author: | Gideon Bradburd [aut, cre] |
| Maintainer: | Gideon Bradburd <bradburd at umich.edu> |
| License: | GPL-3 |
| NeedsCompilation: | yes |
| SystemRequirements: | GNU make |
| Materials: | NEWS ChangeLog |
| CRAN checks: | conStruct results |
| Reference manual: | conStruct.pdf |
| Vignettes: |
format-data model-comparison run-conStruct visualize-results |
| Package source: | conStruct_1.0.6.tar.gz |
| Windows binaries: | r-devel: conStruct_1.0.6.zip, r-release: conStruct_1.0.6.zip, r-oldrel: conStruct_1.0.6.zip |
| macOS binaries: | r-release (arm64): conStruct_1.0.6.tgz, r-oldrel (arm64): conStruct_1.0.6.tgz, r-release (x86_64): conStruct_1.0.6.tgz, r-oldrel (x86_64): conStruct_1.0.6.tgz |
| Old sources: | conStruct archive |
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