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Type: Package
Title: Combination of Independent P-Values
Version: 0.1.4
URL: https://github.com/StatsGirl/Master2021/tree/main/R
BugReports: https://github.com/StatsGirl/Master2021/issues
Description: Provides access to six fundamental statistics that can be used for the purpose of combination p-values. All methods used can referenced here: Heard & Rubin-Delanchy (2017) <doi:10.48550/arXiv.1707.06897>.
License: MIT + file LICENSE
Depends: R (≥ 3.5.0)
Imports: chi, utils, dplyr, spatstat.utils, stats
Encoding: UTF-8
RoxygenNote: 7.1.1
Suggests: testthat (≥ 3.0.0)
Config/testthat/edition: 3
NeedsCompilation: no
Packaged: 2021-09-03 18:26:58 UTC; breyawalker
Author: Breya McGlown [cre, aut]
Maintainer: Breya McGlown <bswlker2@memphis.edu>
Repository: CRAN
Date/Publication: 2021-09-03 19:00:02 UTC

CombinedPValueMethod

Description

#' Input is the test statistic of the previous method selected and it returns the combined p-value

Usage

CombinedPValueMethod(x, name)

Arguments

x

#' test statistic of method used (i.e., Tippett, Stouffer, etc.)

name

# name of method using

Value

Combined P-value

Examples

Output <- SumOfPs(0.1,0.3,.7)
Final <- TippettMethod(Output)
Combined <- CombinedPValueMethod(Final,"Tippett")

Edgington Method

Description

#' Combination p-value method that uses Edgington statistic Summation i=1 to n pi where p equals p-value

Usage

EdMethod(x)

Arguments

x

#' SumOfPs

Value

Combined P-value

Examples

Output <- SumOfPs(0.1,0.3,.7)
Final <- EdMethod(Output)

FishersMethod

Description

#' Combination p-value method that uses Fishers statistic Summation i=1 to n log of pi where p equals p-value

Usage

FishersMethod(x)

Arguments

x

#' SumOfPs

Value

Combined P-value

Examples

Output <- SumOfPs(0.1,0.3,.7)
Final <- FishersMethod(Output)

PearsonsMethod

Description

#' Combination p-value method that uses George statistic Summation i=1 to n log(pi/(1-pi)) where p equals p-value

Usage

GeorgeMethod(x)

Arguments

x

#' SumOfPs

Value

Combined P-value

Examples

Output <- SumOfPs(0.1,0.3,.7)
Final <- GeorgeMethod(Output)

PearsonsMethod

Description

#' Combination p-value method that uses Pearson statistic -Summation i= 1 to n log(1-pi) where p equals p value

Usage

PearsonsMethod(x)

Arguments

x

#' InfinitePs

Value

Combined P-value

Examples

Output <- SumOfPs(0.1,0.3,.7)
Final <- PearsonsMethod(Output)

StoufferMethod

Description

#' Combination p-value method that uses Stouffer statistic Summation i=1 to n inverse CDF of N(0,1)(pi) where p equals p-value

Usage

StoufferMethod(x)

Arguments

x

#' SumOfPs

Value

Combined P-value

Examples

Output <- SumOfPs(0.1,0.3,.7)
Final <- StoufferMethod(Output)

SumOfPs

Description

Converts a list of p-values into a list, n= 2,3,...,k

Usage

SumOfPs(x, ...)

Arguments

x

#' Input n p-values n = 2,3,...,k

...

#list of p values

Value

List of p-values

Examples

Output <- SumOfPs(0.1,0.3,.7)

TippettMethod

Description

#' Combination p-value method that uses Tippett statistic min(p1,...,pn), n= 2,3,...,k where p equals p-value

Usage

TippettMethod(x)

Arguments

x

#' SumOfPs

Value

Combined P-value

Examples

Output <- SumOfPs(0.1,0.3,.7)
Final <- TippettMethod(Output)

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