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coglasso: Collaborative Graphical Lasso - Multi-Omics Network Reconstruction

Reconstruct networks from multi-omics data sets with the collaborative graphical lasso (coglasso) algorithm described in Albanese, A., Kohlen, W., and Behrouzi, P. (2024) <doi:10.48550/arXiv.2403.18602>. Build multiple networks using the coglasso() function, select the best one with stars_coglasso().

Version: 1.0.2
Depends: R (≥ 2.10)
Imports: Matrix, Rcpp (≥ 1.0.11), stats, utils
LinkingTo: Rcpp, RcppEigen
Suggests: igraph, knitr, rmarkdown, testthat (≥ 3.0.0)
Published: 2024-04-03
DOI: 10.32614/CRAN.package.coglasso
Author: Alessio Albanese ORCID iD [aut, cre, cph], Pariya Behrouzi ORCID iD [aut]
Maintainer: Alessio Albanese <alessio.albanese at wur.nl>
BugReports: https://github.com/DrQuestion/coglasso/issues
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: https://github.com/DrQuestion/coglasso, https://drquestion.github.io/coglasso/
NeedsCompilation: yes
Citation: coglasso citation info
Materials: README NEWS
CRAN checks: coglasso results

Documentation:

Reference manual: coglasso.pdf
Vignettes: Reconstructing mult-omics networks with coglasso
Reproduction of manuscript's results

Downloads:

Package source: coglasso_1.0.2.tar.gz
Windows binaries: r-devel: coglasso_1.0.2.zip, r-release: coglasso_1.0.2.zip, r-oldrel: coglasso_1.0.2.zip
macOS binaries: r-release (arm64): coglasso_1.0.2.tgz, r-oldrel (arm64): coglasso_1.0.2.tgz, r-release (x86_64): coglasso_1.0.2.tgz, r-oldrel (x86_64): coglasso_1.0.2.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=coglasso to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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