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chromConverter: Chromatographic File Converter

Reads chromatograms from binary formats into R objects. Currently supports conversion of 'Agilent ChemStation', 'Agilent MassHunter', 'Shimadzu LabSolutions', 'ThermoRaw', and 'Varian Workstation' files as well as various text-based formats. In addition to its internal parsers, chromConverter contains bindings to parsers in external libraries, such as 'Aston' <https://github.com/bovee/aston>, 'Entab' <https://github.com/bovee/entab>, 'rainbow' <https://rainbow-api.readthedocs.io/>, and 'ThermoRawFileParser' <https://github.com/compomics/ThermoRawFileParser>.

Version: 0.7.5
Depends: R (≥ 4.1.0)
Imports: bitops, fs, purrr, readxl, reticulate (≥ 1.41.0), stringr, tidyr, utils, RaMS, tibble, xml2, bit64, data.table, base64enc, jsonlite, digest
Suggests: entab, ncdf4, pbapply, testthat (≥ 3.0.0), mzR, chromConverterExtraTests
Published: 2025-03-31
DOI: 10.32614/CRAN.package.chromConverter
Author: Ethan Bass ORCID iD [aut, cre], James Dillon [ctb, cph] (Author and copyright holder of source code adapted from the 'Chromatography Toolbox' for parsing 'Agilent' FID files.), Evan Shi [ctb, cph] (Author and copyright holder of source code adapted from 'rainbow' for parsing 'Agilent' UV files.)
Maintainer: Ethan Bass <ethanbass at gmail.com>
BugReports: https://github.com/ethanbass/chromConverter/issues/
License: GPL (≥ 3)
URL: https://ethanbass.github.io/chromConverter/, https://github.com/ethanbass/chromConverter/
NeedsCompilation: no
Additional_repositories: https://ethanbass.github.io/drat/, https://ethanbass.r-universe.dev/
Language: en-US
Citation: chromConverter citation info
Materials: README NEWS
In views: ChemPhys
CRAN checks: chromConverter results

Documentation:

Reference manual: chromConverter.pdf

Downloads:

Package source: chromConverter_0.7.5.tar.gz
Windows binaries: r-devel: chromConverter_0.7.5.zip, r-release: chromConverter_0.2.1.zip, r-oldrel: chromConverter_0.2.1.zip
macOS binaries: r-devel (arm64): chromConverter_0.7.5.tgz, r-release (arm64): chromConverter_0.7.5.tgz, r-oldrel (arm64): chromConverter_0.7.5.tgz, r-devel (x86_64): chromConverter_0.7.5.tgz, r-release (x86_64): chromConverter_0.7.5.tgz, r-oldrel (x86_64): chromConverter_0.7.5.tgz
Old sources: chromConverter archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=chromConverter to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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