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cauphy

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The Cauchy Process to model trait evolution on phylogenies.

Installation

Stable version on the CRAN

The development version can be installed from GitHub using the remotes package:

install.packages("remotes")
remotes::install_github(repo = "gilles-didier/cauphy", ref = "dev")

Documentation

See package documentation (references and vignettes) here: https://gilles-didier.github.io/cauphy/.

(Built with pkgdown).

Reference

Bastide, P. and Didier, G. (2023), The Cauchy Process on Phylogenies: a Tractable Model for Pulsed Evolution. Systematic Biology. doi:10.1093/sysbio/syad053. [bioRxiv].

Pronunciation

Pronounce cauphy like coffee, with a French accent: /ko.fi/.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.
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